Clear cell adenocarcinoma of kidney

C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Cancer registry: Topography ICD-O-3 C64
  • Cancer registry: Morphology ICD-O-3 8310
  • Cancer registry: Behaviour codes 3

1 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF9

Case counts by codes

FinnGen case counts by registry codes:

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No upset table: script not run.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 6437 2713 3712
Only index persons 6255 2645 3610
Unadjusted period prevalence (%)
Whole population 0.09 0.08 0.10
Only index persons 0.12 0.10 0.14
Median age at first event (years)
Whole population 68.51 70.36 67.19
Only index persons 68.46 70.31 67.11

-FinnGen-

Key figures

All Female Male
Number of individuals 1354 506 848
Unadjusted period prevalence (%) 0.34 0.20 0.43
Median age at first event (years) 67.96 68.33 67.73

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC and mortality.

Females

Parameter HR [95% CI] p-value
C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC 2.698 [2.27, 3.2] < 0.001
Birth year 0.999 [0.99, 1.01] 0.837

During the follow-up period (1.1.1998 — 31.12.2019), 784 out of 2362 females with C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC died.

Males

Parameter HR [95% CI] p-value
C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC 3.296 [2.72, 3.99] < 0.001
Birth year 0.988 [0.98, 1.0] 0.014

During the follow-up period (1.1.1998 — 31.12.2019), 1085 out of 3148 males with C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC died.

Mortality risk

Mortality risk for people of age

years, who have C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC.

N-year risk Females Males
1 0.253% 0.725%
5 1.759% 4.214%
10 4.525% 9.553%
15 8.495% 17.156%
20 15.292% 28.183%

Relationships between endpoints

Index endpoint: C3_KIDNEY_CLEAR_CELL_CARCINOMA_EXALLC – Clear cell adenocarcinoma of kidney

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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