Trichomoniasis

AB1_TRICHOMONIASIS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 A59
  • Hospital discharge: ICD-9 131
  • Hospital discharge: ICD-8 131
  • Cause of death: ICD-10 A59
  • Cause of death: ICD-9 131
  • Cause of death: ICD-8 131

2 out of 7 registries used, show all original rules.

264

4. Check minimum number of events

None

264

5. Include endpoints

None

264

6. Filter based on genotype QC (FinnGen only)

250

Control definitions (FinnGen only)

Control exclude AB1_SEXUAL_TRANSMISSION

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2807 2630 154
Only index persons 2299 2200 99
Unadjusted period prevalence (%)
Whole population 0.07 0.08 0.00
Only index persons 0.08 0.08 0.00
Median age at first event (years)
Whole population 28.96 28.00 43.83
Only index persons 26.98 26.72 32.82

-FinnGen-

Key figures

All Female Male
Number of individuals 250 236 14
Unadjusted period prevalence (%) 0.09 0.09 0.01
Median age at first event (years) 25.54 24.41 44.51

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint AB1_TRICHOMONIASIS and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have AB1_TRICHOMONIASIS.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: AB1_TRICHOMONIASIS – Trichomoniasis

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data