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Unspecified parasitic disease

EFO Endpoint Browser PheWeb

AB1_PARASITIC_NOS

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — B89
  • Hospital discharge: ICD-9 — 136
  • Hospital discharge: ICD-8 — 136
  • Hospital discharge: excluded ICD-9 — 1361A
  • Cause of death: ICD-10 — B89
  • Cause of death: ICD-9 — 136
  • Cause of death: ICD-8 — 136
  • Cause of death: excluded ICD-9 — 1361A

2 out of 7 registries used, show all original rules.

269

4. Check minimum number of events

None

269

5. Include endpoints

None

269

6. Filter based on genotype QC (FinnGen only)

264

Control definitions (FinnGen only)

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3445 1243 2130
Only index persons 2322 862 1460
Unadjusted period prevalence (%)
Whole population 0.05 0.04 0.06
Only index persons 0.05 0.03 0.06
Median age at first event (years)
Whole population 32.23 33.08 31.02
Only index persons 26.02 24.89 26.69

-FinnGen-

Key figures

All Female Male
Number of individuals 264 121 143
Unadjusted period prevalence (%) 0.06 0.05 0.07
Median age at first event (years) 27.88 21.15 33.58

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

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Association

Association between endpoint AB1_PARASITIC_NOS and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have AB1_PARASITIC_NOS.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

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Index endpoint: AB1_PARASITIC_NOS – Unspecified parasitic disease

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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