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This is a non-core endpoint: only basic statistics are computed.

See these related core endpoints for full statistics:

Other rickettsioses

EFO Endpoint Browser

AB1_OTHER_RICEKTTSIOSES

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — A79
  • Hospital discharge: ICD-9 — 08[2]
  • Hospital discharge: ICD-8 — 08[2]
  • Hospital discharge: excluded ICD-9 — 0820A
  • Cause of death: ICD-10 — A79
  • Cause of death: ICD-9 — 08[2]
  • Cause of death: ICD-8 — 08[2]
  • Cause of death: excluded ICD-9 — 0820A

2 out of 7 registries used, show all original rules.

12

4. Check minimum number of events

None

12

5. Include endpoints

None

12

6. Filter based on genotype QC (FinnGen only)

11

Control definitions (FinnGen only)

Control exclude AB1_RICKETTSIOSES

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

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FinnGen case counts by registry codes:

Not enough data for upset plot.

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 122 51 70
Only index persons 109 45 64
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.00
Only index persons 0.00 0.00 0.00
Median age at first event (years)
Whole population 52.70 58.76 47.91
Only index persons 50.87 56.04 47.24

-FinnGen-

Key figures

All Female Male
Number of individuals 11 5 6
Unadjusted period prevalence (%) 0.00 0.00 0.00
Median age at first event (years) 52.16 52.81 51.61

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

Mortality – FinRegistry

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Association

Association between endpoint AB1_OTHER_RICEKTTSIOSES and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have AB1_OTHER_RICEKTTSIOSES.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

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Index endpoint: AB1_OTHER_RICEKTTSIOSES – Other rickettsioses

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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