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Mumps

EFO Endpoint Browser PheWeb

AB1_MUMPS

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — B26
  • Hospital discharge: ICD-9 — 07[2]
  • Hospital discharge: ICD-8 — 07[2]
  • Cause of death: ICD-10 — B26
  • Cause of death: ICD-9 — 07[2]
  • Cause of death: ICD-8 — 07[2]

2 out of 7 registries used, show all original rules.

919

4. Check minimum number of events

None

919

5. Include endpoints

None

919

6. Filter based on genotype QC (FinnGen only)

901

Control definitions (FinnGen only)

Control exclude AB1_OTHER_VIRAL

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF5

Case counts by codes

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FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 8359 3269 5066
Only index persons 7697 2996 4701
Unadjusted period prevalence (%)
Whole population 0.12 0.09 0.14
Only index persons 0.15 0.11 0.18
Median age at first event (years)
Whole population 13.70 16.85 11.57
Only index persons 12.74 15.45 11.01

-FinnGen-

Key figures

All Female Male
Number of individuals 901 432 469
Unadjusted period prevalence (%) 0.20 0.17 0.24
Median age at first event (years) 15.11 16.74 13.60

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

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Association

Association between endpoint AB1_MUMPS and mortality.

Females

Parameter HR [95% CI] p-value
AB1_MUMPS 1.488 [1.0, 2.22] 0.052
Birth year 0.993 [0.98, 1.0] 0.138

During the follow-up period (1.1.1998 — 31.12.2019), 73 out of 395 females with AB1_MUMPS died.

Males

Parameter HR [95% CI] p-value
AB1_MUMPS 1.256 [0.86, 1.83] 0.236
Birth year 0.989 [0.98, 1.0] 0.017

During the follow-up period (1.1.1998 — 31.12.2019), 52 out of 412 males with AB1_MUMPS died.

Mortality risk

Mortality risk for people of age

years, who have AB1_MUMPS.

N-year risk Females Males
1 0.134% 0.263%
5 0.869% 1.591%
10 2.195% 3.844%
15 4.167% 7.27%
20 6.882% 12.32%

Relationships between endpoints

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Index endpoint: AB1_MUMPS – Mumps

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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