Other congenital malformations of circulatory system

Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q28
  • Cause of death: ICD-10 Q28

2 out of 7 registries used, show all original rules.

817

4. Check minimum number of events

None

817

5. Include endpoints

None

817

6. Filter based on genotype QC (FinnGen only)

789

Control definitions (FinnGen only)

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF4
Parent code in ICD-10 Q2
Name in latin Aliae malformationes congenitae systematis circulatorii

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 5679 2954 2695
Only index persons 5251 2773 2478
Unadjusted period prevalence (%)
Whole population 0.08 0.08 0.08
Only index persons 0.10 0.10 0.09
Median age at first event (years)
Whole population 50.81 51.53 50.08
Only index persons 51.08 51.74 50.35

-FinnGen-

Key figures

All Female Male
Number of individuals 789 449 340
Unadjusted period prevalence (%) 0.17 0.18 0.17
Median age at first event (years) 54.19 52.07 57.00

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM and mortality.

Females

Parameter HR [95% CI] p-value
Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM 1.412 [1.2, 1.67] < 0.001
Birth year 0.995 [0.99, 1.0] 0.218

During the follow-up period (1.1.1998 — 31.12.2019), 247 out of 2415 females with Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM died.

Males

Parameter HR [95% CI] p-value
Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM 1.509 [1.28, 1.78] < 0.001
Birth year 0.989 [0.98, 1.0] 0.02

During the follow-up period (1.1.1998 — 31.12.2019), 309 out of 2209 males with Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM died.

Mortality risk

Mortality risk for people of age

years, who have Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM.

N-year risk Females Males
1 0.111% 0.301%
5 0.689% 1.751%
10 1.803% 4.426%
15 3.836% 8.529%
20 6.932% 14.452%

Relationships between endpoints

Index endpoint: Q17_OTHER_CONGEN_MALFO_CIRCULATO_SYSTEM – Other congenital malformations of circulatory system

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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