COPD/asthma/ILD related infections

PULM_INFECTIONS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

None

0 out of 7 registries used, show all original rules.

0

4. Check minimum number of events

None

0

5. Include endpoints

150478

6. Filter based on genotype QC (FinnGen only)

144808

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

No data for upset plot.

No data for upset table.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2053597 887115 1149809
Only index persons 1568301 681421 886880
Unadjusted period prevalence (%)
Whole population 29.10 25.41 32.13
Only index persons 30.03 25.05 33.86
Median age at first event (years)
Whole population 30.48 42.53 20.63
Only index persons 29.05 40.23 20.46

-FinnGen-

Key figures

All Female Male
Number of individuals 144808 67880 76928
Unadjusted period prevalence (%) 33.02 26.66 38.63
Median age at first event (years) 42.98 43.04 42.92

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint PULM_INFECTIONS and mortality.

Females

Parameter HR [95% CI] p-value
PULM_INFECTIONS 2.696 [2.5, 2.91] < 0.001
Birth year 0.988 [0.98, 1.0] 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 127782 out of 600825 females with PULM_INFECTIONS died.

Males

Parameter HR [95% CI] p-value
PULM_INFECTIONS 3.237 [2.98, 3.52] < 0.001
Birth year 0.978 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 139881 out of 608631 males with PULM_INFECTIONS died.

Mortality risk

Mortality risk for people of age

years, who have PULM_INFECTIONS.

N-year risk Females Males
1 0.192% 0.286%
5 0.961% 1.828%
10 2.17% 4.524%
15 4.088% 8.177%
20 7.123% 13.01%

Relationships between endpoints

Index endpoint: PULM_INFECTIONS – COPD/asthma/ILD related infections

GWS hits: 8

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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