Tonsillectomy and adenotomy

J10_TONSILLECTOMY

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Operations: NOMESCO codes ^EMB[1-3]
  • Operations: Finnish Hospital League codes ^445[1-3]$

1 out of 7 registries used, show all original rules.

36351

4. Check minimum number of events

None

36351

5. Include endpoints

None

36351

6. Filter based on genotype QC (FinnGen only)

35097

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze DF6v3

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 371676 179635 191591
Only index persons 334868 164824 170044
Unadjusted period prevalence (%)
Whole population 5.25 5.15 5.35
Only index persons 6.28 6.06 6.49
Median age at first event (years)
Whole population 7.52 9.41 5.70
Only index persons 8.76 11.26 6.35

-FinnGen-

Key figures

All Female Male
Number of individuals 35097 23606 11491
Unadjusted period prevalence (%) 8.13 9.27 5.77
Median age at first event (years) 16.67 16.88 16.25

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint J10_TONSILLECTOMY and mortality.

Females

Parameter HR [95% CI] p-value
J10_TONSILLECTOMY 0.908 [0.8, 1.04] 0.152
Birth year 0.999 [0.99, 1.01] 0.835

During the follow-up period (1.1.1998 — 31.12.2019), 1204 out of 148707 females with J10_TONSILLECTOMY died.

Males

Parameter HR [95% CI] p-value
J10_TONSILLECTOMY 1.159 [1.03, 1.31] 0.018
Birth year 0.986 [0.98, 1.0] 0.004

During the follow-up period (1.1.1998 — 31.12.2019), 2053 out of 158040 males with J10_TONSILLECTOMY died.

Mortality risk

Mortality risk for people of age

years, who have J10_TONSILLECTOMY.

N-year risk Females Males
1 0.083% 0.2%
5 0.544% 1.283%
10 1.463% 3.223%
15 2.727% 6.037%
20 5.13% 10.269%

Relationships between endpoints

Index endpoint: J10_TONSILLECTOMY – Tonsillectomy and adenotomy

GWS hits: 30

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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