mental retardation: ['Subnormal intellectual functioning which originates during the developmental period. This has multiple potential etiologies, including genetic defects and perinatal insults. Intelligence quotient (IQ) scores are commonly used to determine whether an individual is mentally retarded. IQ scores between 70 and 79 are in the borderline mentally retarded range. Scores below 67 are in the retarded range. (Joynt, Clinical Neurology, 1992, Ch55, p28)']
Kela-code for behavioural disturbances in mental retardation
DOID EFO Endpoint Browser PheWeb
F5_KELARET
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
473681 |
1. Apply sex-specific ruleNone |
473681 |
2. Check conditionsNone |
473681 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
1 out of 7 registries used, show all original rules. |
287 |
4. Check minimum number of eventsNone |
287 |
5. Include endpointsNone |
287 |
6. Filter based on genotype QC (FinnGen only) |
262 |
Control definitions (FinnGen only)
Control exclude
F5_MENTRET
Extra metadata
Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Kela-code for behavioural disturbances in mental retardation
based on the number of shared cases.
Similar with more cases:
Similar with less cases:
Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 12361 | 5572 | 6725 |
| Only index persons | 9845 | 4324 | 5521 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.17 | 0.16 | 0.19 |
| Only index persons | 0.19 | 0.16 | 0.21 |
| Median age at first event (years) | |||
| Whole population | 25.49 | 28.68 | 22.73 |
| Only index persons | 24.12 | 26.82 | 22.01 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 262 | 126 | 136 |
| Unadjusted period prevalence (%) | 0.06 | 0.05 | 0.07 |
| Median age at first event (years) | 24.54 | 26.12 | 23.08 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
No data
Mortality – FinRegistry
↥Association
Association between endpoint F5_KELARET and mortality.
Females
| Parameter | HR [95% CI] | p-value |
|---|---|---|
| F5_KELARET | 7.437 [6.07, 9.11] | < 0.001 |
| Birth year | 0.993 [0.98, 1.0] | 0.092 |
During the follow-up period (1.1.1998 — 31.12.2019), 226 out of 1281 females with F5_KELARET died.
Males
| Parameter | HR [95% CI] | p-value |
|---|---|---|
| F5_KELARET | 4.05 [3.42, 4.8] | < 0.001 |
| Birth year | 0.987 [0.98, 1.0] | 0.01 |
During the follow-up period (1.1.1998 — 31.12.2019), 339 out of 2311 males with F5_KELARET died.
Mortality risk
Mortality risk for people of age
years, who have F5_KELARET.| N-year risk | Females | Males |
|---|---|---|
| 1 | 0.86% | 0.752% |
| 5 | 4.271% | 4.842% |
| 10 | 9.845% | 11.323% |
| 15 | 17.928% | 20.999% |
| 20 | 28.931% | 33.385% |
Relationships between endpoints
↥Index endpoint: F5_KELARET – Kela-code for behavioural disturbances in mental retardation
GWS hits: -
Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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