Carcinoma in situ of vulva

CD2_INSITU_VULVA_EXALLC

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

only females

-

2. Check conditions

  • not C3_VULVA
-

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D07.1&
  • Hospital discharge: ICD-9 2333B
  • Cause of death: ICD-10 D07.1&
  • Cause of death: ICD-9 2333B
  • Cancer registry: Topography ICD-O-3 C51
  • Cancer registry: Morphology ICD-O-3 ANY
  • Cancer registry: Behaviour codes 2

3 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF9
Parent code in ICD-10 D07
Name in latin Carcinoma in situ penis

Case counts by codes

FinnGen case counts by registry codes:

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Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 525 525 -
Only index persons 473 473 -
Unadjusted period prevalence (%)
Whole population 0.02 0.02 -
Only index persons 0.02 0.02 -
Median age at first event (years)
Whole population - 56.55 -
Only index persons - 55.59 -

-FinnGen-

Key figures

All Female Male
Number of individuals 227 227 -
Unadjusted period prevalence (%) 0.09 0.09 -
Median age at first event (years) 57.52 57.52 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint CD2_INSITU_VULVA_EXALLC and mortality.

Females

Parameter HR [95% CI] p-value
CD2_INSITU_VULVA_EXALLC 1.318 [1.01, 1.73] 0.045
Birth year 0.995 [0.99, 1.0] 0.251

During the follow-up period (1.1.1998 — 31.12.2019), 88 out of 377 females with CD2_INSITU_VULVA_EXALLC died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have CD2_INSITU_VULVA_EXALLC.

N-year risk Females Males
1 0.11% No data
5 0.698% No data
10 1.909% No data
15 3.734% No data
20 6.473% No data

Relationships between endpoints

Index endpoint: CD2_INSITU_VULVA_EXALLC – Carcinoma in situ of vulva

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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