Benign neoplasm: Pituitary gland, craniopharyngeal duct

CD2_BENIGN_PITUITARY_CRANIPHAR

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D35.2&, D35.3
  • Hospital discharge: ICD-9 2273
  • Hospital discharge: ICD-8 2262
  • Cause of death: ICD-10 D35.2&, D35.3
  • Cause of death: ICD-9 2273
  • Cause of death: ICD-8 2262

2 out of 7 registries used, show all original rules.

1736

4. Check minimum number of events

None

1736

5. Include endpoints

None

1736

6. Filter based on genotype QC (FinnGen only)

1666

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 10221 5749 4361
Only index persons 9206 5345 3861
Unadjusted period prevalence (%)
Whole population 0.15 0.16 0.12
Only index persons 0.18 0.20 0.15
Median age at first event (years)
Whole population 50.74 47.54 55.24
Only index persons 49.72 46.32 54.42

-FinnGen-

Key figures

All Female Male
Number of individuals 1666 980 686
Unadjusted period prevalence (%) 0.37 0.38 0.34
Median age at first event (years) 50.44 46.57 55.96

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_PITUITARY_CRANIPHAR and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_PITUITARY_CRANIPHAR 1.615 [1.4, 1.86] < 0.001
Birth year 0.995 [0.99, 1.0] 0.242

During the follow-up period (1.1.1998 — 31.12.2019), 512 out of 4286 females with CD2_BENIGN_PITUITARY_CRANIPHAR died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_PITUITARY_CRANIPHAR 1.312 [1.15, 1.5] < 0.001
Birth year 0.983 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 610 out of 3161 males with CD2_BENIGN_PITUITARY_CRANIPHAR died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_PITUITARY_CRANIPHAR.

N-year risk Females Males
1 0.146% 0.276%
5 0.905% 1.452%
10 2.203% 3.392%
15 4.48% 6.597%
20 7.905% 11.263%

Relationships between endpoints

Index endpoint: CD2_BENIGN_PITUITARY_CRANIPHAR – Benign neoplasm: Pituitary gland, craniopharyngeal duct

GWS hits: 2

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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