Benign neoplasm: Parathyroid gland

CD2_BENIGN_PARATHYROID

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

473681

1. Apply sex-specific rule

None

473681

2. Check conditions

None

473681

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D35.1&
  • Hospital discharge: ICD-9 2271
  • Cause of death: ICD-10 D35.1&
  • Cause of death: ICD-9 2271

2 out of 7 registries used, show all original rules.

330

4. Check minimum number of events

None

330

5. Include endpoints

None

330

6. Filter based on genotype QC (FinnGen only)

323

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 3
First used in FinnGen datafreeze DF2
Parent code in ICD-10 D35
Name in latin Neoplasma benignum glandulae parathyreoideae

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2464 1832 617
Only index persons 2183 1635 548
Unadjusted period prevalence (%)
Whole population 0.04 0.05 0.02
Only index persons 0.05 0.06 0.02
Median age at first event (years)
Whole population 63.70 64.32 61.99
Only index persons 62.91 63.38 61.51

-FinnGen-

Key figures

All Female Male
Number of individuals 323 227 96
Unadjusted period prevalence (%) 0.08 0.09 0.05
Median age at first event (years) 60.49 59.82 62.06

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_PARATHYROID and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_PARATHYROID 1.159 [1.0, 1.35] 0.058
Birth year 0.995 [0.99, 1.0] 0.266

During the follow-up period (1.1.1998 — 31.12.2019), 274 out of 1306 females with CD2_BENIGN_PARATHYROID died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_PARATHYROID 1.321 [1.02, 1.71] 0.035
Birth year 0.989 [0.98, 1.0] 0.021

During the follow-up period (1.1.1998 — 31.12.2019), 101 out of 462 males with CD2_BENIGN_PARATHYROID died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_PARATHYROID.

N-year risk Females Males
1 0.131% 0.225%
5 0.641% 1.462%
10 1.589% 3.921%
15 3.173% 7.784%
20 5.666% 13.282%

Relationships between endpoints

Index endpoint: CD2_BENIGN_PARATHYROID – Benign neoplasm: Parathyroid gland

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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