No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
473681 |
1. Apply sex-specific ruleNone |
473681 |
2. Check conditionsNone |
473681 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
2 out of 7 registries used, show all original rules. |
87 |
4. Check minimum number of eventsNone |
87 |
5. Include endpointsNone |
87 |
6. Filter based on genotype QC (FinnGen only) |
85 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D36
Name in latin
Neoplasma benignum lymphonodorum
Similar endpoints
↥List of similar endpoints to
Benign neoplasm: Lymph nodes
based on the number of shared cases.
Similar with more cases:
- Benign neoplasm: Lymph nodes
- Benign neoplasm of other and unspecified sites
- Benign neoplasm of other and unspecified sites
- Benign neoplasms
- Benign neoplasms
Similar with less cases:
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 852 | 474 | 370 |
| Only index persons | 714 | 415 | 299 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.01 | 0.01 | 0.01 |
| Only index persons | 0.01 | 0.02 | 0.01 |
| Median age at first event (years) | |||
| Whole population | 49.64 | 50.35 | 48.54 |
| Only index persons | 47.74 | 49.63 | 45.12 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 85 | 58 | 27 |
| Unadjusted period prevalence (%) | 0.02 | 0.02 | 0.01 |
| Median age at first event (years) | 48.29 | 46.00 | 53.20 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
No data
Mortality – FinRegistry
↥Association
Association between endpoint CD2_BENIGN_LYMPHNODES and mortality.
Females
| Parameter | HR [95% CI] | p-value |
|---|---|---|
| CD2_BENIGN_LYMPHNODES | 1.777 [1.35, 2.34] | < 0.001 |
| Birth year | 1.0 [0.99, 1.01] | 0.901 |
During the follow-up period (1.1.1998 — 31.12.2019), 98 out of 393 females with CD2_BENIGN_LYMPHNODES died.
Males
| Parameter | HR [95% CI] | p-value |
|---|---|---|
| CD2_BENIGN_LYMPHNODES | 2.227 [1.65, 3.0] | < 0.001 |
| Birth year | 0.99 [0.98, 1.0] | 0.086 |
During the follow-up period (1.1.1998 — 31.12.2019), 101 out of 327 males with CD2_BENIGN_LYMPHNODES died.
Mortality risk
Mortality risk for people of age
years, who have CD2_BENIGN_LYMPHNODES.| N-year risk | Females | Males |
|---|---|---|
| 1 | 0.232% | 0.424% |
| 5 | 1.325% | 2.999% |
| 10 | 3.068% | 7.057% |
| 15 | 5.479% | 13.282% |
| 20 | 9.918% | 22.164% |
Relationships between endpoints
↥Index endpoint: CD2_BENIGN_LYMPHNODES – Benign neoplasm: Lymph nodes
GWS hits: -
Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
Loading data